Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 SPDYE18-201ENST00000510091 1050 ntBASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 AC099568.2-201ENST00000609194 695 ntBASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 AL121723.1-201ENST00000445194 1519 ntBASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SDHAF3Q9NRP4 AC092127.1-201ENST00000567093 3455 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 GNAQP1-201ENST00000444815 1067 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 RPL13AP25-201ENST00000484130 612 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AC023310.3-201ENST00000557027 670 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AC100756.1-201ENST00000562736 682 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AC138749.3-201ENST00000567691 622 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AC027307.3-201ENST00000594262 1100 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AC116165.1-201ENST00000611806 668 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 SLC7A15P-201ENST00000424028 1363 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AC087481.3-201ENST00000602886 1894 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.29□□□□□ -0.12
SDHAF3Q9NRP4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SDHAF3Q9NRP4 AL365209.1-201ENST00000624418 6473 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms