Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.62□□□□□ -0.23
PCDHB16Q9NRJ7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 AC136621.1-201ENST00000624017 2304 ntBASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 AC105250.1-201ENST00000509378 2057 ntBASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 AL645939.2-201ENST00000427340 991 ntBASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 RN7SL589P-201ENST00000481268 310 ntBASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 AC061975.2-201ENST00000581722 295 ntBASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
PCDHB16Q9NRJ7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AL139385.1-201ENST00000611744 3272 ntBASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AL109954.1-202ENST00000564051 2148 ntBASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 KRT18P3-201ENST00000451602 1288 ntBASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AC018845.2-201ENST00000568326 409 ntBASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 AC006486.2-201ENST00000624246 2199 ntBASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.6□□□□□ -0.23
PCDHB16Q9NRJ7 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms