Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 AP002414.4-201ENST00000589764 1148 ntBASIC18.55■□□□□ 0.56
RTN4Q9NQC3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC18.55■□□□□ 0.56
RTN4Q9NQC3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 POM121L3P-201ENST00000419331 1163 ntBASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AC026616.1-201ENST00000523157 525 ntBASIC18.54■□□□□ 0.56
RTN4Q9NQC3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AC013467.2-201ENST00000605472 835 ntBASIC18.54■□□□□ 0.56
RTN4Q9NQC3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 AC097359.2-201ENST00000604992 2389 ntBASIC18.54■□□□□ 0.56
RTN4Q9NQC3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC18.54■□□□□ 0.56
RTN4Q9NQC3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 AC006277.1-201ENST00000624348 1610 ntBASIC18.53■□□□□ 0.56
RTN4Q9NQC3 AC009084.2-201ENST00000624046 2810 ntBASIC18.53■□□□□ 0.56
RTN4Q9NQC3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 ABCD1P5-201ENST00000445663 754 ntBASIC18.53■□□□□ 0.56
RTN4Q9NQC3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 AL139011.1-202ENST00000642063 584 ntBASIC18.53■□□□□ 0.56
RTN4Q9NQC3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 AC022497.1-201ENST00000624916 3691 ntBASIC18.53■□□□□ 0.56
RTN4Q9NQC3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN4Q9NQC3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RTN4Q9NQC3 AC079776.2-201ENST00000641154 1609 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms