Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 AC112191.1-201ENST00000523689 701 ntBASIC19.13■□□□□ 0.65
UPF2Q9HAU5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC19.13■□□□□ 0.65
UPF2Q9HAU5 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 AC026979.3-201ENST00000607315 403 ntBASIC19.12■□□□□ 0.65
UPF2Q9HAU5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC19.12■□□□□ 0.65
UPF2Q9HAU5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 EEF1DP4-201ENST00000446006 880 ntBASIC19.11■□□□□ 0.65
UPF2Q9HAU5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UPF2Q9HAU5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms