Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 MIR943-201ENST00000401286 94 ntBASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 MROH4P-201ENST00000431302 1578 ntBASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AC138969.3-201ENST00000546612 1459 ntBASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AC138932.2-201ENST00000548268 1459 ntBASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AC126755.4-201ENST00000549796 1459 ntBASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 LINC01101-201ENST00000622953 1884 ntBASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AC044860.1-202ENST00000559481 777 ntBASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AL590560.3-201ENST00000623350 461 ntBASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 AL121723.1-201ENST00000445194 1519 ntBASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC40Q9H9A6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 WASH3P-207ENST00000560956 1394 ntBASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC40Q9H9A6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms