Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 AC067750.1-201ENST00000608826 6545 ntBASIC14.41□□□□□ -0.1
POLR2J3Q9H1A7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 WASH3P-207ENST00000560956 1394 ntBASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 FO538757.1-201ENST00000623083 1397 ntBASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 MIR574-201ENST00000385209 96 ntBASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 KRT18P32-201ENST00000424695 1287 ntBASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AC005237.2-201ENST00000434368 219 ntBASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AC005829.1-201ENST00000570002 483 ntBASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AC007967.4-201ENST00000614700 386 ntBASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AL513210.1-201ENST00000629608 234 ntBASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 ZBED1P1-201ENST00000502364 1930 ntBASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.4□□□□□ -0.1
POLR2J3Q9H1A7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
POLR2J3Q9H1A7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms