Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TSPY26P-202ENST00000565928 3884 ntBASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 LINC01101-201ENST00000622953 1884 ntBASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 GNAQP1-201ENST00000444815 1067 ntBASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 SPTLC1P1-201ENST00000447199 261 ntBASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 AC093004.1-201ENST00000508850 424 ntBASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 AC026410.3-201ENST00000514280 936 ntBASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 MIR3197-201ENST00000582241 73 ntBASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 AC099568.2-201ENST00000609194 695 ntBASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSER1Q9C0I3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 AC004066.1-201ENST00000502488 802 ntBASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 AC092364.2-202ENST00000597012 1073 ntBASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 AC009118.2-201ENST00000613275 655 ntBASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 AC013726.1-201ENST00000563747 2285 ntBASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.31■□□□□ 0.36
CCSER1Q9C0I3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 SLC7A15P-201ENST00000424028 1363 ntBASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms