Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.26■□□□□ 0.03
COL25A1Q9BXS0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL25A1Q9BXS0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 AHCYP4-201ENST00000419201 1315 ntBASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 FAM86FP-201ENST00000338711 969 ntBASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 POLR2LP1-206ENST00000444785 187 ntBASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL25A1Q9BXS0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 KRT8P6-201ENST00000399259 1207 ntBASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AC004066.1-201ENST00000502488 802 ntBASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AP002490.2-201ENST00000524791 560 ntBASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AC023968.2-201ENST00000560593 1049 ntBASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 MIR2392-201ENST00000584881 84 ntBASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AP001282.1-201ENST00000531301 1499 ntBASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL25A1Q9BXS0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 AC009093.2-202ENST00000620513 2079 ntBASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.23■□□□□ 0.03
COL25A1Q9BXS0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms