Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 PAUPAR-201ENST00000630360 2965 ntBASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 ACKR1-201ENST00000368121 1240 ntBASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 CR383656.12-201ENST00000549567 513 ntBASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 AC005225.4-201ENST00000557330 545 ntBASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 AP001063.1-201ENST00000568332 529 ntBASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 AC136621.1-201ENST00000624017 2304 ntBASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM62Q9BVG3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AC093525.8-201ENST00000624099 1342 ntBASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 C18orf15-201ENST00000623680 2534 ntBASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms