Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.81□□□□□ -0.2
VRK1Q99986 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.81□□□□□ -0.2
VRK1Q99986 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VRK1Q99986 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.81□□□□□ -0.2
VRK1Q99986 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.81□□□□□ -0.2
VRK1Q99986 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 AC006486.2-201ENST00000624246 2199 ntBASIC13.81□□□□□ -0.2
VRK1Q99986 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
VRK1Q99986 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.81□□□□□ -0.2
VRK1Q99986 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.81□□□□□ -0.2
VRK1Q99986 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.81□□□□□ -0.2
VRK1Q99986 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.81□□□□□ -0.2
VRK1Q99986 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.81□□□□□ -0.2
VRK1Q99986 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.81□□□□□ -0.2
VRK1Q99986 SERBP1P5-201ENST00000510079 1181 ntBASIC13.81□□□□□ -0.2
VRK1Q99986 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.81□□□□□ -0.2
VRK1Q99986 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.81□□□□□ -0.2
VRK1Q99986 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
VRK1Q99986 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.81□□□□□ -0.2
VRK1Q99986 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VRK1Q99986 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.81□□□□□ -0.2
VRK1Q99986 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VRK1Q99986 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VRK1Q99986 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 AC106881.1-201ENST00000605849 3329 ntBASIC13.8□□□□□ -0.2
VRK1Q99986 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
VRK1Q99986 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms