Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.02□□□□□ -0.32
CCL13Q99616 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCL13Q99616 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
CCL13Q99616 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.02□□□□□ -0.32
CCL13Q99616 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
CCL13Q99616 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCL13Q99616 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL13Q99616 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CCL13Q99616 AL353779.1-201ENST00000434793 351 ntBASIC13.02□□□□□ -0.33
CCL13Q99616 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL13Q99616 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL13Q99616 RN7SL399P-201ENST00000471648 279 ntBASIC13.02□□□□□ -0.33
CCL13Q99616 FAM86LP-201ENST00000478302 853 ntBASIC13.02□□□□□ -0.33
CCL13Q99616 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.02□□□□□ -0.33
CCL13Q99616 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL13Q99616 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.02□□□□□ -0.33
CCL13Q99616 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL13Q99616 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL13Q99616 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCL13Q99616 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
CCL13Q99616 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CCL13Q99616 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL13Q99616 AC073347.1-201ENST00000421633 2643 ntBASIC13.02□□□□□ -0.33
CCL13Q99616 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL13Q99616 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL13Q99616 TMBIM7P-203ENST00000641617 1718 ntBASIC13.02□□□□□ -0.33
CCL13Q99616 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCL13Q99616 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCL13Q99616 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCL13Q99616 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL13Q99616 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL13Q99616 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL13Q99616 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 AC087499.6-201ENST00000411576 835 ntBASIC13.01□□□□□ -0.33
CCL13Q99616 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL13Q99616 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 AC104596.2-201ENST00000512793 793 ntBASIC13.01□□□□□ -0.33
CCL13Q99616 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL13Q99616 AC190387.1-201ENST00000551683 408 ntBASIC13.01□□□□□ -0.33
CCL13Q99616 MIR3197-201ENST00000582241 73 ntBASIC13.01□□□□□ -0.33
CCL13Q99616 CHCHD2P3-201ENST00000603038 451 ntBASIC13.01□□□□□ -0.33
CCL13Q99616 AL391069.4-201ENST00000609583 481 ntBASIC13.01□□□□□ -0.33
CCL13Q99616 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.01□□□□□ -0.33
CCL13Q99616 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL13Q99616 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CCL13Q99616 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 MYO15B-237ENST00000642007 4893 ntBASIC13.01□□□□□ -0.33
CCL13Q99616 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
CCL13Q99616 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL13Q99616 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CCL13Q99616 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCL13Q99616 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL13Q99616 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL13Q99616 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CCL13Q99616 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL13Q99616 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13□□□□□ -0.33
CCL13Q99616 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms