Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 MIR1202-201ENST00000408529 83 ntBASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 RN7SL560P-201ENST00000577943 264 ntBASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 MIR4741-201ENST00000579822 90 ntBASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 AC008687.7-202ENST00000637404 953 ntBASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC85AQ96PX6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC85AQ96PX6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 DOC2GP-204ENST00000639052 2548 ntBASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 MIR326-201ENST00000362220 95 ntBASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 AC099548.2-209ENST00000480264 625 ntBASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC85AQ96PX6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AL158070.2-201ENST00000623713 1621 ntBASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms