Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CFAP53Q96M91 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP53Q96M91 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 TMEM14DP-201ENST00000422205 345 ntBASIC20.67■□□□□ 0.9
CFAP53Q96M91 NUS1P3-201ENST00000423502 862 ntBASIC20.67■□□□□ 0.9
CFAP53Q96M91 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 AC093433.1-201ENST00000458048 571 ntBASIC20.67■□□□□ 0.9
CFAP53Q96M91 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 AC093525.8-201ENST00000624099 1342 ntBASIC20.67■□□□□ 0.9
CFAP53Q96M91 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 AC132872.4-202ENST00000622924 2756 ntBASIC20.67■□□□□ 0.9
CFAP53Q96M91 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP53Q96M91 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CFAP53Q96M91 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 AC068587.3-201ENST00000526613 355 ntBASIC20.66■□□□□ 0.9
CFAP53Q96M91 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 AC007787.1-201ENST00000588095 1583 ntBASIC20.66■□□□□ 0.9
CFAP53Q96M91 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CFAP53Q96M91 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP53Q96M91 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP53Q96M91 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CFAP53Q96M91 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.65■□□□□ 0.9
CFAP53Q96M91 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP53Q96M91 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CFAP53Q96M91 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CFAP53Q96M91 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP53Q96M91 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms