Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 AC105339.3-201ENST00000560043 636 ntBASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 AL356488.2-201ENST00000602755 427 ntBASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 AC008735.5-201ENST00000623544 497 ntBASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 AL589702.1-201ENST00000641229 1509 ntBASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
CHMP6Q96FZ7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 PMS2P4-201ENST00000412466 1052 ntBASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 AC079781.3-201ENST00000449110 356 ntBASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP6Q96FZ7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CHMP6Q96FZ7 AP002414.3-201ENST00000589352 1468 ntBASIC15.71■□□□□ 0.1
CHMP6Q96FZ7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP6Q96FZ7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.1
CHMP6Q96FZ7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP6Q96FZ7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 AC092910.1-201ENST00000482027 1129 ntBASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 AL031008.1-201ENST00000619963 541 ntBASIC15.7■□□□□ 0.1
CHMP6Q96FZ7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms