Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 AC009779.1-201ENST00000551138 283 ntBASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 E2F3P2-201ENST00000447755 1422 ntBASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM43Q96BQ3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM43Q96BQ3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM43Q96BQ3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM43Q96BQ3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM43Q96BQ3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM43Q96BQ3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TRIM43Q96BQ3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM43Q96BQ3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 AC103810.10-201ENST00000606504 343 ntBASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 FLJ38576-201ENST00000623820 2459 ntBASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM43Q96BQ3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM43Q96BQ3 VDAC1P1-201ENST00000439229 848 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms