Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 AC055811.4-201ENST00000624039 1754 ntBASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 AP000867.3-201ENST00000524675 377 ntBASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 AC109635.5-201ENST00000533593 962 ntBASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 AC084364.1-201ENST00000551967 1556 ntBASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 AC015818.8-201ENST00000587907 1519 ntBASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.21□□□□□ -0.46
MBD3L1Q8WWY6 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 AC023090.2-201ENST00000625182 2110 ntBASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 AC105206.1-202ENST00000314927 2368 ntBASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 SART3-203ENST00000546611 1184 ntBASIC12.2□□□□□ -0.46
MBD3L1Q8WWY6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms