Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 BX640514.1-201ENST00000583223 1918 ntBASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 AC074338.1-201ENST00000416825 156 ntBASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 MKNK2P1-201ENST00000437526 628 ntBASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 AC015910.1-201ENST00000579400 975 ntBASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 KRT8P12-202ENST00000472924 1397 ntBASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC44A1Q8WWI5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC44A1Q8WWI5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 AC012508.2-201ENST00000567613 1472 ntBASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC44A1Q8WWI5 AC104457.1-201ENST00000401024 814 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms