Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC148Q8NFR7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC148Q8NFR7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.89■□□□□ 0.46
CCDC148Q8NFR7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC148Q8NFR7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC148Q8NFR7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC148Q8NFR7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.89■□□□□ 0.46
CCDC148Q8NFR7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 RPL13AP25-201ENST00000484130 612 ntBASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 AC104596.2-201ENST00000512793 793 ntBASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 AC025181.2-201ENST00000606994 802 ntBASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC148Q8NFR7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC148Q8NFR7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms