Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 AL773604.1-201ENST00000617417 272 ntBASIC15.18■□□□□ 0.02
HIPK4Q8NE63 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HIPK4Q8NE63 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 AC127383.1-201ENST00000444697 1800 ntBASIC15.17■□□□□ 0.02
HIPK4Q8NE63 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 CRYGEP-201ENST00000412192 528 ntBASIC15.17■□□□□ 0.02
HIPK4Q8NE63 IGLL3P-201ENST00000412472 434 ntBASIC15.17■□□□□ 0.02
HIPK4Q8NE63 AC098831.1-202ENST00000438821 336 ntBASIC15.17■□□□□ 0.02
HIPK4Q8NE63 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 AL009183.1-201ENST00000603760 355 ntBASIC15.17■□□□□ 0.02
HIPK4Q8NE63 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIPK4Q8NE63 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.16■□□□□ 0.02
HIPK4Q8NE63 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.16■□□□□ 0.02
HIPK4Q8NE63 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms