Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC00311Q8N616 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00311Q8N616 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC00311Q8N616 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00311Q8N616 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LINC00311Q8N616 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00311Q8N616 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.55□□□□□ -0.4
LINC00311Q8N616 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 AC104596.2-201ENST00000512793 793 ntBASIC12.55□□□□□ -0.4
LINC00311Q8N616 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 AL049840.4-201ENST00000602422 811 ntBASIC12.55□□□□□ -0.4
LINC00311Q8N616 AC093813.1-201ENST00000605066 256 ntBASIC12.55□□□□□ -0.4
LINC00311Q8N616 AL662799.1-202ENST00000614205 422 ntBASIC12.55□□□□□ -0.4
LINC00311Q8N616 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC00311Q8N616 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00311Q8N616 AC144831.1-201ENST00000573312 2656 ntBASIC12.55□□□□□ -0.4
LINC00311Q8N616 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00311Q8N616 MST1L-201ENST00000442552 2185 ntBASIC12.54□□□□□ -0.4
LINC00311Q8N616 REXO1L4P-201ENST00000605109 1937 ntBASIC12.54□□□□□ -0.4
LINC00311Q8N616 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00311Q8N616 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.54□□□□□ -0.4
LINC00311Q8N616 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00311Q8N616 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00311Q8N616 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00311Q8N616 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 REXO1L2P-201ENST00000425429 2069 ntBASIC12.54□□□□□ -0.4
LINC00311Q8N616 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00311Q8N616 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00311Q8N616 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00311Q8N616 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00311Q8N616 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00311Q8N616 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms