Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 FGD5P1-202ENST00000614866 2498 ntBASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.58□□□□□ -0.08
DEPDC4Q8N2C3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 LINC00552-201ENST00000625151 2579 ntBASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 AC134407.2-201ENST00000625089 1978 ntBASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 AL671277.1-201ENST00000429656 993 ntBASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEPDC4Q8N2C3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 AC148477.4-201ENST00000613430 1793 ntBASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 PMS2P2-201ENST00000425039 1128 ntBASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SPDYE11-202ENST00000450699 704 ntBASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SPDYE9P-201ENST00000570642 692 ntBASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SPDYE10P-202ENST00000612005 668 ntBASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SPDYE8P-202ENST00000612377 668 ntBASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 AC092902.6-201ENST00000641783 218 ntBASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 KRT18P28-201ENST00000453838 1332 ntBASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DEPDC4Q8N2C3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms