Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 AC092127.1-201ENST00000567093 3455 ntBASIC18.44■□□□□ 0.54
SLX4Q8IY92 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 AC136759.1-202ENST00000530858 2194 ntBASIC18.44■□□□□ 0.54
SLX4Q8IY92 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 AC078875.1-201ENST00000431907 724 ntBASIC18.44■□□□□ 0.54
SLX4Q8IY92 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLX4Q8IY92 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SLX4Q8IY92 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SLX4Q8IY92 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLX4Q8IY92 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 NKILA-202ENST00000614771 2598 ntBASIC18.42■□□□□ 0.54
SLX4Q8IY92 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 AL627231.1-201ENST00000394467 1125 ntBASIC18.42■□□□□ 0.54
SLX4Q8IY92 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.42■□□□□ 0.54
SLX4Q8IY92 AC024909.3-201ENST00000611513 2257 ntBASIC18.42■□□□□ 0.54
SLX4Q8IY92 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLX4Q8IY92 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms