Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AC004840.1-201ENST00000636359 365 ntBASIC13.78□□□□□ -0.2
RTTNQ86VV8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 ST20-AS1-201ENST00000560255 4223 ntBASIC13.78□□□□□ -0.2
RTTNQ86VV8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 AC241585.1-201ENST00000433527 519 ntBASIC13.78□□□□□ -0.2
RTTNQ86VV8 AL512638.1-201ENST00000457493 794 ntBASIC13.78□□□□□ -0.2
RTTNQ86VV8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.78□□□□□ -0.2
RTTNQ86VV8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.78□□□□□ -0.2
RTTNQ86VV8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTTNQ86VV8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.2
RTTNQ86VV8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.77□□□□□ -0.2
RTTNQ86VV8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 AC106881.1-201ENST00000605849 3329 ntBASIC13.77□□□□□ -0.2
RTTNQ86VV8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
RTTNQ86VV8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.77□□□□□ -0.2
RTTNQ86VV8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
RTTNQ86VV8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTTNQ86VV8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.2
RTTNQ86VV8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 AL359258.3-201ENST00000622910 2331 ntBASIC13.77□□□□□ -0.21
RTTNQ86VV8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 DGCR5-201ENST00000399539 862 ntBASIC13.77□□□□□ -0.21
RTTNQ86VV8 SPDYE17-201ENST00000412399 783 ntBASIC13.77□□□□□ -0.21
RTTNQ86VV8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 RAB43P1-201ENST00000561790 589 ntBASIC13.77□□□□□ -0.21
RTTNQ86VV8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 TNRC18P2-201ENST00000417666 2714 ntBASIC13.77□□□□□ -0.21
RTTNQ86VV8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms