Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZNF546Q86UE3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AC211429.1-201ENST00000415277 523 ntBASIC12.98□□□□□ -0.33
ZNF546Q86UE3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AC005412.3-201ENST00000580309 715 ntBASIC12.98□□□□□ -0.33
ZNF546Q86UE3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AL589182.2-201ENST00000619332 1049 ntBASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.98□□□□□ -0.33
ZNF546Q86UE3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF546Q86UE3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 NUS1P2-201ENST00000417358 873 ntBASIC12.97□□□□□ -0.33
ZNF546Q86UE3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 BX005266.1-201ENST00000473402 457 ntBASIC12.97□□□□□ -0.33
ZNF546Q86UE3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 AC012615.1-201ENST00000565797 1299 ntBASIC12.97□□□□□ -0.33
ZNF546Q86UE3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 AL139288.1-201ENST00000623748 933 ntBASIC12.97□□□□□ -0.33
ZNF546Q86UE3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
ZNF546Q86UE3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms