Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RPS9P1-201ENST00000419943 583 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 ISCA2P1-201ENST00000425548 448 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 AC106794.1-201ENST00000506935 792 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 KRT8P4-201ENST00000509735 1454 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 AC010141.1-201ENST00000411585 623 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC9.34□□□□□ -0.92
VPS13BQ7Z7G8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC9.34□□□□□ -0.92
VPS13BQ7Z7G8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.92
VPS13BQ7Z7G8 AC079112.1-201ENST00000454972 939 ntBASIC9.34□□□□□ -0.92
VPS13BQ7Z7G8 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.92
VPS13BQ7Z7G8 AL022344.2-201ENST00000568976 968 ntBASIC9.34□□□□□ -0.92
VPS13BQ7Z7G8 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
VPS13BQ7Z7G8 AC105137.3-201ENST00000617588 984 ntBASIC9.34□□□□□ -0.92
VPS13BQ7Z7G8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AC025271.4-201ENST00000621477 1726 ntBASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AC009955.4-201ENST00000597192 544 ntBASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AL161773.1-201ENST00000624845 863 ntBASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AL358472.3-201ENST00000608147 415 ntBASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AL157792.1-201ENST00000488281 530 ntBASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS13BQ7Z7G8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms