Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TERF1P3-201ENST00000505638 1227 ntBASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 BANF1P1-201ENST00000553684 263 ntBASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP1BQ7LBR1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 AC004987.2-201ENST00000395959 1148 ntBASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 FAM207CP-201ENST00000443486 507 ntBASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 AC138035.3-201ENST00000622706 2791 ntBASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 AC006449.6-201ENST00000612330 2296 ntBASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP1BQ7LBR1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms