Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 AL133267.1-201ENST00000398220 340 ntBASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 LINC01115-203ENST00000606068 577 ntBASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 AL590560.3-201ENST00000623350 461 ntBASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 AF228730.6-201ENST00000641497 218 ntBASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 AC084121.3-201ENST00000641716 218 ntBASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 OR2I1P-209ENST00000641730 5365 ntBASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 AC148477.4-201ENST00000613430 1793 ntBASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST2H3AQ71DI3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 KRT18P28-201ENST00000453838 1332 ntBASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 C8orf49-201ENST00000525043 1968 ntBASIC13.67□□□□□ -0.22
HIST2H3AQ71DI3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms