Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC011742.3-201ENST00000439053 820 ntBASIC12.63□□□□□ -0.39
VPS13CQ709C8 AC021723.1-201ENST00000486306 515 ntBASIC12.63□□□□□ -0.39
VPS13CQ709C8 PGAM1P5-201ENST00000548011 764 ntBASIC12.63□□□□□ -0.39
VPS13CQ709C8 MIR5196-201ENST00000578146 115 ntBASIC12.63□□□□□ -0.39
VPS13CQ709C8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 LRRC59-203ENST00000576448 1531 ntBASIC12.63□□□□□ -0.39
VPS13CQ709C8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 AC027139.1-201ENST00000565286 951 ntBASIC12.63□□□□□ -0.39
VPS13CQ709C8 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 AL023803.2-201ENST00000620080 638 ntBASIC12.63□□□□□ -0.39
VPS13CQ709C8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 TBC1D3J-201ENST00000620719 1426 ntBASIC12.62□□□□□ -0.39
VPS13CQ709C8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 AC105137.3-201ENST00000617588 984 ntBASIC12.62□□□□□ -0.39
VPS13CQ709C8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 AL137783.1-201ENST00000623494 1896 ntBASIC12.62□□□□□ -0.39
VPS13CQ709C8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 AC005324.6-201ENST00000587972 613 ntBASIC12.62□□□□□ -0.39
VPS13CQ709C8 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.62□□□□□ -0.39
VPS13CQ709C8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VPS13CQ709C8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 AC090164.2-201ENST00000611487 516 ntBASIC12.61□□□□□ -0.39
VPS13CQ709C8 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 LINC02447-202ENST00000501888 2146 ntBASIC12.61□□□□□ -0.39
VPS13CQ709C8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 AL133466.1-201ENST00000447582 150 ntBASIC12.61□□□□□ -0.39
VPS13CQ709C8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 AC027237.1-201ENST00000560942 655 ntBASIC12.61□□□□□ -0.39
VPS13CQ709C8 AC020922.3-201ENST00000595064 547 ntBASIC12.61□□□□□ -0.39
VPS13CQ709C8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 SAMD11P1-201ENST00000571429 661 ntBASIC12.61□□□□□ -0.39
VPS13CQ709C8 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 AC008741.2-201ENST00000612792 3115 ntBASIC12.61□□□□□ -0.39
VPS13CQ709C8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VPS13CQ709C8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VPS13CQ709C8 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms