Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 AC092364.2-201ENST00000596710 2692 ntBASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 AC006335.1-201ENST00000445200 547 ntBASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 MIR4683-201ENST00000579659 81 ntBASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 AL136301.1-201ENST00000615830 422 ntBASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.46■□□□□ 0.23
CNKSR3Q6P9H4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CNKSR3Q6P9H4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
CNKSR3Q6P9H4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CNKSR3Q6P9H4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CNKSR3Q6P9H4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CNKSR3Q6P9H4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
CNKSR3Q6P9H4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 RPL5P21-201ENST00000404620 815 ntBASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AC234782.1-201ENST00000451950 919 ntBASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AC100827.2-201ENST00000563214 1194 ntBASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AL358472.3-201ENST00000608147 415 ntBASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AF254983.2-201ENST00000612331 135 ntBASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AL157791.1-201ENST00000553667 1699 ntBASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AC006480.2-201ENST00000609770 1337 ntBASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 AC092978.1-202ENST00000637590 1327 ntBASIC16.45■□□□□ 0.22
CNKSR3Q6P9H4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 AC008267.1-201ENST00000474858 1069 ntBASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 AC125604.1-201ENST00000496255 707 ntBASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 AC090164.2-201ENST00000611487 516 ntBASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 AL353770.1-201ENST00000614915 403 ntBASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms