Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 BTBD6P1-201ENST00000412176 1267 ntBASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AC104982.3-201ENST00000581995 514 ntBASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AC103810.3-201ENST00000583567 96 ntBASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 EEF1DP1-201ENST00000585891 896 ntBASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 AL513523.2-202ENST00000427283 2040 ntBASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 AL391280.1-201ENST00000506969 1062 ntBASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 AC073413.1-201ENST00000603927 732 ntBASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHROOM1Q2M3G4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC090616.6-203ENST00000579186 1945 ntBASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms