Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.53■□□□□ 0.4
HTRA3P83110 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.53■□□□□ 0.4
HTRA3P83110 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 CTBP2P8-201ENST00000422584 1330 ntBASIC17.53■□□□□ 0.4
HTRA3P83110 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.53■□□□□ 0.4
HTRA3P83110 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.53■□□□□ 0.4
HTRA3P83110 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.53■□□□□ 0.4
HTRA3P83110 BCL2-203ENST00000589955 5011 ntBASIC17.53■□□□□ 0.4
HTRA3P83110 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.53■□□□□ 0.4
HTRA3P83110 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.53■□□□□ 0.4
HTRA3P83110 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HTRA3P83110 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC17.53■□□□□ 0.4
HTRA3P83110 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.53■□□□□ 0.4
HTRA3P83110 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.53■□□□□ 0.4
HTRA3P83110 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC17.53■□□□□ 0.4
HTRA3P83110 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 AC142086.5-202ENST00000562500 217 ntBASIC17.53■□□□□ 0.4
HTRA3P83110 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.53■□□□□ 0.4
HTRA3P83110 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.53■□□□□ 0.4
HTRA3P83110 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.53■□□□□ 0.4
HTRA3P83110 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.53■□□□□ 0.4
HTRA3P83110 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.53■□□□□ 0.4
HTRA3P83110 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
HTRA3P83110 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.53■□□□□ 0.4
HTRA3P83110 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTRA3P83110 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.52■□□□□ 0.4
HTRA3P83110 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HTRA3P83110 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 AC060834.1-201ENST00000443027 2032 ntBASIC17.52■□□□□ 0.4
HTRA3P83110 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.52■□□□□ 0.4
HTRA3P83110 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.52■□□□□ 0.4
HTRA3P83110 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
HTRA3P83110 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.52■□□□□ 0.4
HTRA3P83110 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HTRA3P83110 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HTRA3P83110 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 RPL35P9-201ENST00000446059 350 ntBASIC17.52■□□□□ 0.4
HTRA3P83110 RN7SL582P-201ENST00000491078 279 ntBASIC17.52■□□□□ 0.4
HTRA3P83110 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC17.52■□□□□ 0.4
HTRA3P83110 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.52■□□□□ 0.4
HTRA3P83110 CTBP2P6-201ENST00000526402 1229 ntBASIC17.52■□□□□ 0.4
HTRA3P83110 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.52■□□□□ 0.4
HTRA3P83110 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTRA3P83110 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.52■□□□□ 0.4
HTRA3P83110 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.52■□□□□ 0.4
HTRA3P83110 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.52■□□□□ 0.39
HTRA3P83110 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
HTRA3P83110 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HTRA3P83110 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.52■□□□□ 0.39
HTRA3P83110 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.52■□□□□ 0.39
HTRA3P83110 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HTRA3P83110 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTRA3P83110 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HTRA3P83110 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTRA3P83110 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
HTRA3P83110 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
HTRA3P83110 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.51■□□□□ 0.39
HTRA3P83110 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTRA3P83110 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTRA3P83110 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HTRA3P83110 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTRA3P83110 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.51■□□□□ 0.39
HTRA3P83110 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HTRA3P83110 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTRA3P83110 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HTRA3P83110 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HTRA3P83110 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.51■□□□□ 0.39
HTRA3P83110 AF274858.1-201ENST00000406288 372 ntBASIC17.51■□□□□ 0.39
HTRA3P83110 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HTRA3P83110 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.51■□□□□ 0.39
HTRA3P83110 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.51■□□□□ 0.39
HTRA3P83110 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms