Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TPM4P67936 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.48■□□□□ 0.39
TPM4P67936 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.48■□□□□ 0.39
TPM4P67936 AC079776.4-201ENST00000511039 504 ntBASIC17.48■□□□□ 0.39
TPM4P67936 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.48■□□□□ 0.39
TPM4P67936 RARRES2P8-201ENST00000566335 367 ntBASIC17.48■□□□□ 0.39
TPM4P67936 AL138918.1-201ENST00000568306 659 ntBASIC17.48■□□□□ 0.39
TPM4P67936 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM4P67936 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.48■□□□□ 0.39
TPM4P67936 AC026979.3-201ENST00000607315 403 ntBASIC17.48■□□□□ 0.39
TPM4P67936 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.48■□□□□ 0.39
TPM4P67936 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM4P67936 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TPM4P67936 PEG13-201ENST00000631594 5667 ntBASIC17.48■□□□□ 0.39
TPM4P67936 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM4P67936 AC005912.2-201ENST00000619492 2400 ntBASIC17.48■□□□□ 0.39
TPM4P67936 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM4P67936 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM4P67936 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM4P67936 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM4P67936 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM4P67936 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
TPM4P67936 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TPM4P67936 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM4P67936 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM4P67936 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM4P67936 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM4P67936 AL049840.3-201ENST00000602669 611 ntBASIC17.47■□□□□ 0.39
TPM4P67936 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.47■□□□□ 0.39
TPM4P67936 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.47■□□□□ 0.39
TPM4P67936 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM4P67936 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 CYP4F24P-201ENST00000586049 1580 ntBASIC17.47■□□□□ 0.39
TPM4P67936 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TPM4P67936 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TPM4P67936 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TPM4P67936 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TPM4P67936 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM4P67936 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.47■□□□□ 0.39
TPM4P67936 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.46■□□□□ 0.39
TPM4P67936 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.46■□□□□ 0.39
TPM4P67936 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TPM4P67936 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM4P67936 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TPM4P67936 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.46■□□□□ 0.39
TPM4P67936 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.46■□□□□ 0.39
TPM4P67936 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM4P67936 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.46■□□□□ 0.39
TPM4P67936 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TPM4P67936 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.46■□□□□ 0.39
TPM4P67936 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms