Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
RPL39P62891 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.04□□□□□ -0.64
RPL39P62891 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.04□□□□□ -0.64
RPL39P62891 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.04□□□□□ -0.64
RPL39P62891 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.04□□□□□ -0.64
RPL39P62891 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.04□□□□□ -0.64
RPL39P62891 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.04□□□□□ -0.64
RPL39P62891 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.04□□□□□ -0.64
RPL39P62891 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.04□□□□□ -0.64
RPL39P62891 AC117500.6-201ENST00000624871 588 ntBASIC11.04□□□□□ -0.64
RPL39P62891 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
RPL39P62891 MTHFR-210ENST00000641407 2387 ntBASIC11.04□□□□□ -0.64
RPL39P62891 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.04□□□□□ -0.64
RPL39P62891 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.04□□□□□ -0.64
RPL39P62891 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
RPL39P62891 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RPL39P62891 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.04□□□□□ -0.64
RPL39P62891 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
RPL39P62891 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
RPL39P62891 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.04□□□□□ -0.64
RPL39P62891 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 WASH3P-207ENST00000560956 1394 ntBASIC11.03□□□□□ -0.64
RPL39P62891 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 FO538757.1-201ENST00000623083 1397 ntBASIC11.03□□□□□ -0.64
RPL39P62891 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.03□□□□□ -0.64
RPL39P62891 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.03□□□□□ -0.64
RPL39P62891 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
RPL39P62891 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.03□□□□□ -0.64
RPL39P62891 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.03□□□□□ -0.64
RPL39P62891 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
RPL39P62891 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 AC108751.1-201ENST00000490852 363 ntBASIC11.03□□□□□ -0.64
RPL39P62891 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.03□□□□□ -0.64
RPL39P62891 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.03□□□□□ -0.64
RPL39P62891 PRELID1P1-202ENST00000567272 903 ntBASIC11.03□□□□□ -0.64
RPL39P62891 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.03□□□□□ -0.64
RPL39P62891 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.03□□□□□ -0.64
RPL39P62891 AL450472.2-201ENST00000603663 1156 ntBASIC11.03□□□□□ -0.64
RPL39P62891 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RPL39P62891 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
RPL39P62891 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
RPL39P62891 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
RPL39P62891 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RPL39P62891 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms