Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA3P59666 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 AC026271.2-201ENST00000428091 497 ntBASIC13.66□□□□□ -0.22
DEFA3P59666 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.66□□□□□ -0.22
DEFA3P59666 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DEFA3P59666 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.66□□□□□ -0.22
DEFA3P59666 AL359075.1-203ENST00000462729 1002 ntBASIC13.66□□□□□ -0.22
DEFA3P59666 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.66□□□□□ -0.22
DEFA3P59666 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.66□□□□□ -0.22
DEFA3P59666 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 AP003071.4-201ENST00000562276 1284 ntBASIC13.66□□□□□ -0.22
DEFA3P59666 AP000525.1-201ENST00000608286 694 ntBASIC13.66□□□□□ -0.22
DEFA3P59666 MIR5787-201ENST00000611784 55 ntBASIC13.66□□□□□ -0.22
DEFA3P59666 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.66□□□□□ -0.22
DEFA3P59666 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
DEFA3P59666 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.66□□□□□ -0.22
DEFA3P59666 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DEFA3P59666 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.66□□□□□ -0.22
DEFA3P59666 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DEFA3P59666 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 KRT18P22-201ENST00000402024 1347 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.65□□□□□ -0.22
DEFA3P59666 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 AC134407.2-201ENST00000625089 1978 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 AC015818.8-201ENST00000587907 1519 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.65□□□□□ -0.22
DEFA3P59666 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
DEFA3P59666 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.65□□□□□ -0.22
DEFA3P59666 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
DEFA3P59666 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.65□□□□□ -0.22
DEFA3P59666 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.65□□□□□ -0.22
DEFA3P59666 SPDYE21P-201ENST00000413323 827 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 AC004945.1-201ENST00000416738 983 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA3P59666 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.65□□□□□ -0.22
DEFA3P59666 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA3P59666 RARRES2P6-201ENST00000567333 442 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 AC011840.4-201ENST00000578471 627 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 AC011467.2-201ENST00000598425 242 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 AL353135.1-201ENST00000606729 504 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 AC023090.2-201ENST00000625182 2110 ntBASIC13.65□□□□□ -0.22
DEFA3P59666 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DEFA3P59666 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
DEFA3P59666 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
DEFA3P59666 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA3P59666 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
DEFA3P59666 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.65□□□□□ -0.22
DEFA3P59666 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.65□□□□□ -0.22
DEFA3P59666 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DEFA3P59666 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
DEFA3P59666 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
DEFA3P59666 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 CES1P1-201ENST00000421606 1704 ntBASIC13.64□□□□□ -0.23
DEFA3P59666 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.64□□□□□ -0.23
DEFA3P59666 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DEFA3P59666 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms