Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.02□□□□□ -0.16
SUMO3P55854 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.02□□□□□ -0.16
SUMO3P55854 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 C1QBPP1-201ENST00000400117 770 ntBASIC14.02□□□□□ -0.17
SUMO3P55854 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.02□□□□□ -0.17
SUMO3P55854 CRB3P1-201ENST00000449338 276 ntBASIC14.02□□□□□ -0.17
SUMO3P55854 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.02□□□□□ -0.17
SUMO3P55854 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.02□□□□□ -0.17
SUMO3P55854 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.02□□□□□ -0.17
SUMO3P55854 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SUMO3P55854 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.02□□□□□ -0.17
SUMO3P55854 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SUMO3P55854 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.02□□□□□ -0.17
SUMO3P55854 AC133539.2-201ENST00000604757 467 ntBASIC14.02□□□□□ -0.17
SUMO3P55854 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SUMO3P55854 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SUMO3P55854 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SUMO3P55854 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.02□□□□□ -0.17
SUMO3P55854 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SUMO3P55854 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SUMO3P55854 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.02□□□□□ -0.17
SUMO3P55854 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SUMO3P55854 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SUMO3P55854 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 FLJ16779-201ENST00000612722 7638 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 CICP11-201ENST00000434745 2827 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
SUMO3P55854 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.01□□□□□ -0.17
SUMO3P55854 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.01□□□□□ -0.17
SUMO3P55854 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 AC093525.8-201ENST00000624099 1342 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SUMO3P55854 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.01□□□□□ -0.17
SUMO3P55854 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.01□□□□□ -0.17
SUMO3P55854 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.01□□□□□ -0.17
SUMO3P55854 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.01□□□□□ -0.17
SUMO3P55854 TP53TG3HP-202ENST00000569755 579 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 AC124283.3-201ENST00000570869 594 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 SPDYE22P-201ENST00000582158 798 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 AC027307.3-201ENST00000594262 1100 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 CHCHD2P3-201ENST00000603038 451 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 MIR8072-201ENST00000614241 80 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.01□□□□□ -0.17
SUMO3P55854 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.01□□□□□ -0.17
SUMO3P55854 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.01□□□□□ -0.17
SUMO3P55854 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 AC006058.4-201ENST00000624016 1670 ntBASIC14.01□□□□□ -0.17
SUMO3P55854 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SUMO3P55854 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SUMO3P55854 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.01□□□□□ -0.17
SUMO3P55854 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SUMO3P55854 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms