Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.74□□□□□ -0.05
LIM2P55344 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.74□□□□□ -0.05
LIM2P55344 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.74□□□□□ -0.05
LIM2P55344 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.74□□□□□ -0.05
LIM2P55344 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.74□□□□□ -0.05
LIM2P55344 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.74□□□□□ -0.05
LIM2P55344 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.74□□□□□ -0.05
LIM2P55344 AC092364.2-202ENST00000597012 1073 ntBASIC14.74□□□□□ -0.05
LIM2P55344 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LIM2P55344 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
LIM2P55344 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.74□□□□□ -0.05
LIM2P55344 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.74□□□□□ -0.05
LIM2P55344 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LIM2P55344 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LIM2P55344 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 AL136379.1-201ENST00000623471 2642 ntBASIC14.74□□□□□ -0.05
LIM2P55344 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LIM2P55344 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.74□□□□□ -0.05
LIM2P55344 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIM2P55344 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.73□□□□□ -0.05
LIM2P55344 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 SLC7A15P-201ENST00000424028 1363 ntBASIC14.73□□□□□ -0.05
LIM2P55344 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
LIM2P55344 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.73□□□□□ -0.05
LIM2P55344 CICP24-201ENST00000605464 2705 ntBASIC14.73□□□□□ -0.05
LIM2P55344 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.73□□□□□ -0.05
LIM2P55344 DFFBP1-201ENST00000433250 979 ntBASIC14.73□□□□□ -0.05
LIM2P55344 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.73□□□□□ -0.05
LIM2P55344 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 AC055876.2-201ENST00000531834 546 ntBASIC14.73□□□□□ -0.05
LIM2P55344 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.73□□□□□ -0.05
LIM2P55344 AC036164.1-201ENST00000570544 333 ntBASIC14.73□□□□□ -0.05
LIM2P55344 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.73□□□□□ -0.05
LIM2P55344 AL132655.2-201ENST00000596276 594 ntBASIC14.73□□□□□ -0.05
LIM2P55344 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.73□□□□□ -0.05
LIM2P55344 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.73□□□□□ -0.05
LIM2P55344 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 AC007541.1-201ENST00000570282 1469 ntBASIC14.73□□□□□ -0.05
LIM2P55344 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LIM2P55344 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
LIM2P55344 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
LIM2P55344 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LIM2P55344 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIM2P55344 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LIM2P55344 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIM2P55344 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.72□□□□□ -0.05
LIM2P55344 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.72□□□□□ -0.05
LIM2P55344 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIM2P55344 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIM2P55344 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIM2P55344 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIM2P55344 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIM2P55344 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIM2P55344 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.72□□□□□ -0.05
LIM2P55344 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIM2P55344 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.72□□□□□ -0.05
LIM2P55344 RPL5P21-201ENST00000404620 815 ntBASIC14.72□□□□□ -0.05
LIM2P55344 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.72□□□□□ -0.05
LIM2P55344 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.72□□□□□ -0.05
LIM2P55344 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIM2P55344 RN7SL399P-201ENST00000471648 279 ntBASIC14.72□□□□□ -0.05
LIM2P55344 TERF1P3-201ENST00000505638 1227 ntBASIC14.72□□□□□ -0.05
LIM2P55344 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.72□□□□□ -0.05
LIM2P55344 RRP7BP-205ENST00000566851 833 ntBASIC14.72□□□□□ -0.05
LIM2P55344 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms