Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CACNB3P54284 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CACNB3P54284 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.23■□□□□ 0.51
CACNB3P54284 RNA5SP423-201ENST00000517127 109 ntBASIC18.23■□□□□ 0.51
CACNB3P54284 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.23■□□□□ 0.51
CACNB3P54284 PPY2P-201ENST00000582808 702 ntBASIC18.23■□□□□ 0.51
CACNB3P54284 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 AC004466.1-201ENST00000599515 1080 ntBASIC18.23■□□□□ 0.51
CACNB3P54284 AC073413.1-201ENST00000603927 732 ntBASIC18.23■□□□□ 0.51
CACNB3P54284 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.23■□□□□ 0.51
CACNB3P54284 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CACNB3P54284 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CACNB3P54284 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.22■□□□□ 0.51
CACNB3P54284 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 KRT8P4-201ENST00000509735 1454 ntBASIC18.22■□□□□ 0.51
CACNB3P54284 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNB3P54284 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.22■□□□□ 0.51
CACNB3P54284 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 PCDHB19P-201ENST00000570871 2371 ntBASIC18.22■□□□□ 0.51
CACNB3P54284 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.22■□□□□ 0.51
CACNB3P54284 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CACNB3P54284 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CACNB3P54284 POM121L8P-201ENST00000417732 1281 ntBASIC18.22■□□□□ 0.51
CACNB3P54284 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNB3P54284 POM121L9P-203ENST00000441984 1285 ntBASIC18.22■□□□□ 0.51
CACNB3P54284 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNB3P54284 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.22■□□□□ 0.51
CACNB3P54284 AC091804.1-201ENST00000486888 567 ntBASIC18.22■□□□□ 0.51
CACNB3P54284 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNB3P54284 AL391280.1-201ENST00000506969 1062 ntBASIC18.22■□□□□ 0.51
CACNB3P54284 SCARNA20.5-201ENST00000516991 142 ntBASIC18.22■□□□□ 0.51
CACNB3P54284 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNB3P54284 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNB3P54284 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CACNB3P54284 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 TNRC18P3-201ENST00000441896 2691 ntBASIC18.22■□□□□ 0.51
CACNB3P54284 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.22■□□□□ 0.51
CACNB3P54284 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CACNB3P54284 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CACNB3P54284 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 AC138028.6-201ENST00000616106 1482 ntBASIC18.21■□□□□ 0.51
CACNB3P54284 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CACNB3P54284 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.21■□□□□ 0.51
CACNB3P54284 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.21■□□□□ 0.51
CACNB3P54284 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CACNB3P54284 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.21■□□□□ 0.51
CACNB3P54284 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.21■□□□□ 0.51
CACNB3P54284 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.21■□□□□ 0.51
CACNB3P54284 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CACNB3P54284 BX284668.4-201ENST00000453917 508 ntBASIC18.21■□□□□ 0.51
CACNB3P54284 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.21■□□□□ 0.51
CACNB3P54284 SAMD11P1-201ENST00000571429 661 ntBASIC18.21■□□□□ 0.51
CACNB3P54284 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 AC020914.3-201ENST00000594712 304 ntBASIC18.21■□□□□ 0.51
CACNB3P54284 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.21■□□□□ 0.51
CACNB3P54284 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.21■□□□□ 0.51
CACNB3P54284 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.21■□□□□ 0.51
CACNB3P54284 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.21■□□□□ 0.51
CACNB3P54284 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CACNB3P54284 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.21■□□□□ 0.51
CACNB3P54284 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms