Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK7P50613 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.07■□□□□ 0.32
CDK7P50613 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK7P50613 MIR4706-201ENST00000582134 82 ntBASIC17.07■□□□□ 0.32
CDK7P50613 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK7P50613 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK7P50613 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.07■□□□□ 0.32
CDK7P50613 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK7P50613 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.07■□□□□ 0.32
CDK7P50613 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CDK7P50613 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK7P50613 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK7P50613 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDK7P50613 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK7P50613 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDK7P50613 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDK7P50613 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDK7P50613 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.06■□□□□ 0.32
CDK7P50613 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CDK7P50613 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK7P50613 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDK7P50613 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.06■□□□□ 0.32
CDK7P50613 CYP46A4P-201ENST00000414953 267 ntBASIC17.06■□□□□ 0.32
CDK7P50613 AC079178.1-201ENST00000420915 656 ntBASIC17.06■□□□□ 0.32
CDK7P50613 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.06■□□□□ 0.32
CDK7P50613 NKAIN1P1-201ENST00000435754 582 ntBASIC17.06■□□□□ 0.32
CDK7P50613 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CDK7P50613 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 MPRIPP1-201ENST00000452433 1089 ntBASIC17.06■□□□□ 0.32
CDK7P50613 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.06■□□□□ 0.32
CDK7P50613 IMP3P2-201ENST00000489760 475 ntBASIC17.06■□□□□ 0.32
CDK7P50613 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.06■□□□□ 0.32
CDK7P50613 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK7P50613 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK7P50613 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.06■□□□□ 0.32
CDK7P50613 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDK7P50613 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CDK7P50613 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CDK7P50613 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDK7P50613 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK7P50613 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK7P50613 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CDK7P50613 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK7P50613 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK7P50613 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDK7P50613 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDK7P50613 AC006449.5-201ENST00000610658 2098 ntBASIC17.05■□□□□ 0.32
CDK7P50613 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDK7P50613 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK7P50613 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 MIR648-201ENST00000385046 94 ntBASIC17.05■□□□□ 0.32
CDK7P50613 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CDK7P50613 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDK7P50613 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK7P50613 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.05■□□□□ 0.32
CDK7P50613 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.05■□□□□ 0.32
CDK7P50613 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK7P50613 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK7P50613 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.05■□□□□ 0.32
CDK7P50613 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.05■□□□□ 0.32
CDK7P50613 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
CDK7P50613 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.05■□□□□ 0.32
CDK7P50613 AC007663.3-201ENST00000609632 465 ntBASIC17.05■□□□□ 0.32
CDK7P50613 MIR6727-201ENST00000620702 65 ntBASIC17.05■□□□□ 0.32
CDK7P50613 ENPP7P14-201ENST00000621765 1040 ntBASIC17.05■□□□□ 0.32
CDK7P50613 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms