Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.04■□□□□ 0.32
CPT1AP50416 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CPT1AP50416 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPT1AP50416 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.04■□□□□ 0.32
CPT1AP50416 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.04■□□□□ 0.32
CPT1AP50416 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.04■□□□□ 0.32
CPT1AP50416 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPT1AP50416 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPT1AP50416 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CPT1AP50416 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.03■□□□□ 0.32
CPT1AP50416 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.03■□□□□ 0.32
CPT1AP50416 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.03■□□□□ 0.32
CPT1AP50416 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.03■□□□□ 0.32
CPT1AP50416 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CPT1AP50416 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.03■□□□□ 0.32
CPT1AP50416 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.03■□□□□ 0.32
CPT1AP50416 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.03■□□□□ 0.32
CPT1AP50416 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.03■□□□□ 0.32
CPT1AP50416 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CPT1AP50416 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.03■□□□□ 0.32
CPT1AP50416 HIST2H2BC-201ENST00000498492 580 ntBASIC17.03■□□□□ 0.32
CPT1AP50416 AL391280.1-201ENST00000506969 1062 ntBASIC17.03■□□□□ 0.32
CPT1AP50416 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.03■□□□□ 0.32
CPT1AP50416 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.03■□□□□ 0.32
CPT1AP50416 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.03■□□□□ 0.32
CPT1AP50416 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.03■□□□□ 0.32
CPT1AP50416 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.03■□□□□ 0.32
CPT1AP50416 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.03■□□□□ 0.32
CPT1AP50416 NDUFV2P1-201ENST00000596415 907 ntBASIC17.03■□□□□ 0.32
CPT1AP50416 AL451050.2-201ENST00000606967 682 ntBASIC17.03■□□□□ 0.32
CPT1AP50416 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CPT1AP50416 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.03■□□□□ 0.32
CPT1AP50416 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.03■□□□□ 0.32
CPT1AP50416 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CPT1AP50416 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.03■□□□□ 0.32
CPT1AP50416 AC006449.5-201ENST00000610658 2098 ntBASIC17.03■□□□□ 0.32
CPT1AP50416 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPT1AP50416 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.03■□□□□ 0.32
CPT1AP50416 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 AL603832.2-201ENST00000566195 2125 ntBASIC17.02■□□□□ 0.32
CPT1AP50416 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 KRT8P4-201ENST00000509735 1454 ntBASIC17.02■□□□□ 0.32
CPT1AP50416 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CPT1AP50416 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.02■□□□□ 0.32
CPT1AP50416 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.02■□□□□ 0.32
CPT1AP50416 RNA5SP423-201ENST00000517127 109 ntBASIC17.02■□□□□ 0.32
CPT1AP50416 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.02■□□□□ 0.32
CPT1AP50416 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 AC138649.2-201ENST00000615886 705 ntBASIC17.02■□□□□ 0.32
CPT1AP50416 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.02■□□□□ 0.32
CPT1AP50416 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CPT1AP50416 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CPT1AP50416 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPT1AP50416 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.02■□□□□ 0.31
CPT1AP50416 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CPT1AP50416 AC055811.4-201ENST00000624039 1754 ntBASIC17.02■□□□□ 0.31
CPT1AP50416 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CPT1AP50416 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPT1AP50416 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPT1AP50416 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CPT1AP50416 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CPT1AP50416 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CPT1AP50416 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.01■□□□□ 0.31
CPT1AP50416 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPT1AP50416 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CPT1AP50416 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.01■□□□□ 0.31
CPT1AP50416 SERPINA13P-202ENST00000478994 924 ntBASIC17.01■□□□□ 0.31
CPT1AP50416 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms