Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PSEN1P49768 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.7■□□□□ 0.26
PSEN1P49768 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PSEN1P49768 AC011477.6-201ENST00000604980 1927 ntBASIC16.7■□□□□ 0.26
PSEN1P49768 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PSEN1P49768 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PSEN1P49768 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PSEN1P49768 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PSEN1P49768 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PSEN1P49768 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PSEN1P49768 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.7■□□□□ 0.26
PSEN1P49768 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PSEN1P49768 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PSEN1P49768 AC134407.2-201ENST00000625089 1978 ntBASIC16.69■□□□□ 0.26
PSEN1P49768 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PSEN1P49768 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.69■□□□□ 0.26
PSEN1P49768 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.69■□□□□ 0.26
PSEN1P49768 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.69■□□□□ 0.26
PSEN1P49768 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PSEN1P49768 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.69■□□□□ 0.26
PSEN1P49768 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.69■□□□□ 0.26
PSEN1P49768 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.69■□□□□ 0.26
PSEN1P49768 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
PSEN1P49768 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
PSEN1P49768 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PSEN1P49768 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.69■□□□□ 0.26
PSEN1P49768 AC006455.6-201ENST00000426192 893 ntBASIC16.69■□□□□ 0.26
PSEN1P49768 SPTLC1P1-201ENST00000447199 261 ntBASIC16.69■□□□□ 0.26
PSEN1P49768 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.69■□□□□ 0.26
PSEN1P49768 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.69■□□□□ 0.26
PSEN1P49768 PHKG1P2-201ENST00000457537 863 ntBASIC16.69■□□□□ 0.26
PSEN1P49768 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.69■□□□□ 0.26
PSEN1P49768 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.69■□□□□ 0.26
PSEN1P49768 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.69■□□□□ 0.26
PSEN1P49768 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.69■□□□□ 0.26
PSEN1P49768 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.69■□□□□ 0.26
PSEN1P49768 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.69■□□□□ 0.26
PSEN1P49768 RN7SL48P-201ENST00000579283 293 ntBASIC16.69■□□□□ 0.26
PSEN1P49768 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.69■□□□□ 0.26
PSEN1P49768 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 AC034229.4-201ENST00000607861 441 ntBASIC16.69■□□□□ 0.26
PSEN1P49768 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PSEN1P49768 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.69■□□□□ 0.26
PSEN1P49768 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 Z97205.2-201ENST00000564697 1639 ntBASIC16.69■□□□□ 0.26
PSEN1P49768 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PSEN1P49768 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.69■□□□□ 0.26
PSEN1P49768 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PSEN1P49768 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.68■□□□□ 0.26
PSEN1P49768 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PSEN1P49768 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.68■□□□□ 0.26
PSEN1P49768 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PSEN1P49768 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PSEN1P49768 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PSEN1P49768 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.68■□□□□ 0.26
PSEN1P49768 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PSEN1P49768 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PSEN1P49768 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
PSEN1P49768 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.68■□□□□ 0.26
PSEN1P49768 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.68■□□□□ 0.26
PSEN1P49768 AZGP1P1-201ENST00000411909 902 ntBASIC16.68■□□□□ 0.26
PSEN1P49768 PIN1P1-201ENST00000412108 996 ntBASIC16.68■□□□□ 0.26
PSEN1P49768 SEPT14P1-201ENST00000458703 648 ntBASIC16.68■□□□□ 0.26
PSEN1P49768 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.68■□□□□ 0.26
PSEN1P49768 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.68■□□□□ 0.26
PSEN1P49768 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PSEN1P49768 AC004233.3-201ENST00000607794 1269 ntBASIC16.68■□□□□ 0.26
PSEN1P49768 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.68■□□□□ 0.26
PSEN1P49768 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.68■□□□□ 0.26
PSEN1P49768 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.68■□□□□ 0.26
PSEN1P49768 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.68■□□□□ 0.26
PSEN1P49768 AL109936.8-201ENST00000641772 604 ntBASIC16.68■□□□□ 0.26
PSEN1P49768 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PSEN1P49768 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.68■□□□□ 0.26
PSEN1P49768 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms