Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AP006547.1-201ENST00000563435 692 ntBASIC18.36■□□□□ 0.53
TNNI2P48788 LRRC59-203ENST00000576448 1531 ntBASIC18.36■□□□□ 0.53
TNNI2P48788 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TNNI2P48788 ECM1P1-201ENST00000604092 1279 ntBASIC18.36■□□□□ 0.53
TNNI2P48788 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.36■□□□□ 0.53
TNNI2P48788 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TNNI2P48788 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNNI2P48788 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNNI2P48788 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNNI2P48788 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.35■□□□□ 0.53
TNNI2P48788 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.35■□□□□ 0.53
TNNI2P48788 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TNNI2P48788 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TNNI2P48788 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TNNI2P48788 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TNNI2P48788 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.35■□□□□ 0.53
TNNI2P48788 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TNNI2P48788 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.35■□□□□ 0.53
TNNI2P48788 AC091804.1-201ENST00000486888 567 ntBASIC18.35■□□□□ 0.53
TNNI2P48788 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.35■□□□□ 0.53
TNNI2P48788 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.35■□□□□ 0.53
TNNI2P48788 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.35■□□□□ 0.53
TNNI2P48788 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.35■□□□□ 0.53
TNNI2P48788 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.35■□□□□ 0.53
TNNI2P48788 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.35■□□□□ 0.53
TNNI2P48788 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TNNI2P48788 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TNNI2P48788 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNNI2P48788 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TNNI2P48788 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.34■□□□□ 0.53
TNNI2P48788 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TNNI2P48788 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TNNI2P48788 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
TNNI2P48788 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.34■□□□□ 0.53
TNNI2P48788 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.34■□□□□ 0.53
TNNI2P48788 SCARNA20.5-201ENST00000516991 142 ntBASIC18.34■□□□□ 0.53
TNNI2P48788 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.34■□□□□ 0.53
TNNI2P48788 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TNNI2P48788 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TNNI2P48788 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.34■□□□□ 0.53
TNNI2P48788 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.34■□□□□ 0.53
TNNI2P48788 AC020914.3-201ENST00000594712 304 ntBASIC18.34■□□□□ 0.53
TNNI2P48788 DOC2GP-204ENST00000639052 2548 ntBASIC18.34■□□□□ 0.53
TNNI2P48788 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
TNNI2P48788 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TNNI2P48788 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.34■□□□□ 0.53
TNNI2P48788 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNNI2P48788 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.34■□□□□ 0.53
TNNI2P48788 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TNNI2P48788 AC138028.6-201ENST00000616106 1482 ntBASIC18.33■□□□□ 0.53
TNNI2P48788 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TNNI2P48788 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TNNI2P48788 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.33■□□□□ 0.53
TNNI2P48788 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TNNI2P48788 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.33■□□□□ 0.53
TNNI2P48788 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.33■□□□□ 0.53
TNNI2P48788 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNNI2P48788 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TNNI2P48788 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TNNI2P48788 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TNNI2P48788 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TNNI2P48788 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TNNI2P48788 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 AC004945.1-201ENST00000416738 983 ntBASIC18.33■□□□□ 0.52
TNNI2P48788 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.33■□□□□ 0.52
TNNI2P48788 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.33■□□□□ 0.52
TNNI2P48788 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.33■□□□□ 0.52
TNNI2P48788 CNN2P10-201ENST00000443067 918 ntBASIC18.33■□□□□ 0.52
TNNI2P48788 IGHJ2P-201ENST00000454480 60 ntBASIC18.33■□□□□ 0.52
TNNI2P48788 AC004066.1-201ENST00000502488 802 ntBASIC18.33■□□□□ 0.52
TNNI2P48788 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.33■□□□□ 0.52
TNNI2P48788 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms