Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.71□□□□□ -0.05
CDKN2CP42773 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 AC139749.1-202ENST00000617529 3139 ntBASIC14.71□□□□□ -0.05
CDKN2CP42773 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 REXO1L2P-201ENST00000425429 2069 ntBASIC14.71□□□□□ -0.05
CDKN2CP42773 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CDKN2CP42773 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.71□□□□□ -0.05
CDKN2CP42773 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.71□□□□□ -0.05
CDKN2CP42773 AP000347.1-202ENST00000435868 847 ntBASIC14.71□□□□□ -0.05
CDKN2CP42773 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.71□□□□□ -0.05
CDKN2CP42773 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.71□□□□□ -0.05
CDKN2CP42773 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.71□□□□□ -0.05
CDKN2CP42773 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.71□□□□□ -0.05
CDKN2CP42773 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CDKN2CP42773 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2CP42773 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKN2CP42773 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CDKN2CP42773 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CDKN2CP42773 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.71□□□□□ -0.06
CDKN2CP42773 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
CDKN2CP42773 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDKN2CP42773 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKN2CP42773 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKN2CP42773 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CDKN2CP42773 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKN2CP42773 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKN2CP42773 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKN2CP42773 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKN2CP42773 AL079307.3-201ENST00000556114 283 ntBASIC14.7□□□□□ -0.06
CDKN2CP42773 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKN2CP42773 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKN2CP42773 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.7□□□□□ -0.06
CDKN2CP42773 MIR6080-201ENST00000617359 66 ntBASIC14.7□□□□□ -0.06
CDKN2CP42773 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDKN2CP42773 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKN2CP42773 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDKN2CP42773 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKN2CP42773 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDKN2CP42773 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDKN2CP42773 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 AC140479.7-201ENST00000636301 2332 ntBASIC14.7□□□□□ -0.06
CDKN2CP42773 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDKN2CP42773 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2CP42773 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms