Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF9P41273 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF9P41273 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFSF9P41273 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFSF9P41273 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFSF9P41273 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.72■□□□□ 0.27
TNFSF9P41273 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TNFSF9P41273 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFSF9P41273 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TNFSF9P41273 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TNFSF9P41273 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TNFSF9P41273 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 RNU1-114P-201ENST00000365297 166 ntBASIC16.71■□□□□ 0.27
TNFSF9P41273 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.71■□□□□ 0.27
TNFSF9P41273 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.71■□□□□ 0.27
TNFSF9P41273 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.71■□□□□ 0.27
TNFSF9P41273 AP001889.1-201ENST00000525414 633 ntBASIC16.71■□□□□ 0.27
TNFSF9P41273 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.71■□□□□ 0.27
TNFSF9P41273 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.71■□□□□ 0.27
TNFSF9P41273 SAMD11P1-201ENST00000571429 661 ntBASIC16.71■□□□□ 0.27
TNFSF9P41273 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TNFSF9P41273 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.71■□□□□ 0.27
TNFSF9P41273 AC015936.2-201ENST00000593177 259 ntBASIC16.71■□□□□ 0.27
TNFSF9P41273 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.71■□□□□ 0.27
TNFSF9P41273 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.71■□□□□ 0.27
TNFSF9P41273 BX539320.1-201ENST00000623759 877 ntBASIC16.71■□□□□ 0.27
TNFSF9P41273 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.71■□□□□ 0.27
TNFSF9P41273 AL645728.2-202ENST00000641679 227 ntBASIC16.71■□□□□ 0.27
TNFSF9P41273 KRT8P44-201ENST00000441609 1350 ntBASIC16.71■□□□□ 0.27
TNFSF9P41273 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFSF9P41273 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TNFSF9P41273 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFSF9P41273 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFSF9P41273 AC023024.2-201ENST00000623561 1993 ntBASIC16.71■□□□□ 0.27
TNFSF9P41273 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TNFSF9P41273 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TNFSF9P41273 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TNFSF9P41273 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TNFSF9P41273 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
TNFSF9P41273 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TNFSF9P41273 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 AC134312.5-201ENST00000568031 1313 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 AL158070.2-201ENST00000623713 1621 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFSF9P41273 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 AC018665.1-201ENST00000622927 1362 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.7■□□□□ 0.26
TNFSF9P41273 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 BAATP1-201ENST00000412284 1225 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 CROCCP4-201ENST00000457096 498 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 AC004066.1-201ENST00000502488 802 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 AC106760.1-201ENST00000508690 800 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.7■□□□□ 0.26
TNFSF9P41273 HILS1-202ENST00000545329 423 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 PTP4A1P2-201ENST00000546033 454 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.7■□□□□ 0.26
TNFSF9P41273 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.7■□□□□ 0.26
TNFSF9P41273 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFSF9P41273 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.7■□□□□ 0.26
TNFSF9P41273 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms