Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.08■□□□□ 0.16
SCNN1AP37088 CTBP2P3-201ENST00000585629 1255 ntBASIC16.08■□□□□ 0.16
SCNN1AP37088 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.08■□□□□ 0.16
SCNN1AP37088 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.08■□□□□ 0.16
SCNN1AP37088 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.08■□□□□ 0.16
SCNN1AP37088 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SCNN1AP37088 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.08■□□□□ 0.16
SCNN1AP37088 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SCNN1AP37088 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.08■□□□□ 0.16
SCNN1AP37088 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SCNN1AP37088 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.08■□□□□ 0.16
SCNN1AP37088 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCNN1AP37088 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 TCAF2P1-201ENST00000291129 2421 ntBASIC16.07■□□□□ 0.16
SCNN1AP37088 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.07■□□□□ 0.16
SCNN1AP37088 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 AL162726.2-201ENST00000438986 1017 ntBASIC16.07■□□□□ 0.16
SCNN1AP37088 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SCNN1AP37088 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.07■□□□□ 0.16
SCNN1AP37088 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.07■□□□□ 0.16
SCNN1AP37088 AC138761.1-201ENST00000584393 385 ntBASIC16.07■□□□□ 0.16
SCNN1AP37088 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.07■□□□□ 0.16
SCNN1AP37088 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SCNN1AP37088 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SCNN1AP37088 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.07■□□□□ 0.16
SCNN1AP37088 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.07■□□□□ 0.16
SCNN1AP37088 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.07■□□□□ 0.16
SCNN1AP37088 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.07■□□□□ 0.16
SCNN1AP37088 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.07■□□□□ 0.16
SCNN1AP37088 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SCNN1AP37088 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SCNN1AP37088 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCNN1AP37088 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.06■□□□□ 0.16
SCNN1AP37088 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.06■□□□□ 0.16
SCNN1AP37088 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.06■□□□□ 0.16
SCNN1AP37088 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.06■□□□□ 0.16
SCNN1AP37088 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.06■□□□□ 0.16
SCNN1AP37088 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SCNN1AP37088 AL158070.2-201ENST00000623713 1621 ntBASIC16.06■□□□□ 0.16
SCNN1AP37088 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SCNN1AP37088 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.06■□□□□ 0.16
SCNN1AP37088 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 ACKR1-201ENST00000368121 1240 ntBASIC16.06■□□□□ 0.16
SCNN1AP37088 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCNN1AP37088 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms