Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGCLP35914 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.41■□□□□ 0.06
HMGCLP35914 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGCLP35914 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HMGCLP35914 AC004066.1-201ENST00000502488 802 ntBASIC15.41■□□□□ 0.06
HMGCLP35914 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.41■□□□□ 0.06
HMGCLP35914 AC124283.3-201ENST00000570869 594 ntBASIC15.41■□□□□ 0.06
HMGCLP35914 CTBP2P3-201ENST00000585629 1255 ntBASIC15.41■□□□□ 0.06
HMGCLP35914 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.41■□□□□ 0.06
HMGCLP35914 AC027307.3-201ENST00000594262 1100 ntBASIC15.41■□□□□ 0.06
HMGCLP35914 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGCLP35914 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGCLP35914 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HMGCLP35914 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGCLP35914 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HMGCLP35914 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.41■□□□□ 0.06
HMGCLP35914 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMGCLP35914 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HMGCLP35914 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGCLP35914 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HMGCLP35914 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.4■□□□□ 0.06
HMGCLP35914 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGCLP35914 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HMGCLP35914 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGCLP35914 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGCLP35914 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HMGCLP35914 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.4■□□□□ 0.06
HMGCLP35914 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HMGCLP35914 C1QBPP1-201ENST00000400117 770 ntBASIC15.4■□□□□ 0.06
HMGCLP35914 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.4■□□□□ 0.06
HMGCLP35914 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.4■□□□□ 0.06
HMGCLP35914 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.4■□□□□ 0.06
HMGCLP35914 AL359711.2-201ENST00000563105 872 ntBASIC15.4■□□□□ 0.06
HMGCLP35914 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGCLP35914 SAMD11P1-201ENST00000571429 661 ntBASIC15.4■□□□□ 0.06
HMGCLP35914 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 AC133539.2-201ENST00000604757 467 ntBASIC15.4■□□□□ 0.06
HMGCLP35914 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.4■□□□□ 0.06
HMGCLP35914 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
HMGCLP35914 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGCLP35914 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.4■□□□□ 0.06
HMGCLP35914 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
HMGCLP35914 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMGCLP35914 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms