Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.69■□□□□ 0.42
COPB2P35606 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
COPB2P35606 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
COPB2P35606 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COPB2P35606 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPB2P35606 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.68■□□□□ 0.42
COPB2P35606 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.68■□□□□ 0.42
COPB2P35606 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
COPB2P35606 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.68■□□□□ 0.42
COPB2P35606 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
COPB2P35606 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.68■□□□□ 0.42
COPB2P35606 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
COPB2P35606 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
COPB2P35606 GPAA1P2-201ENST00000417923 928 ntBASIC17.68■□□□□ 0.42
COPB2P35606 AL513523.2-202ENST00000427283 2040 ntBASIC17.68■□□□□ 0.42
COPB2P35606 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.68■□□□□ 0.42
COPB2P35606 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.68■□□□□ 0.42
COPB2P35606 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.68■□□□□ 0.42
COPB2P35606 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 KRT8P13-201ENST00000463294 1010 ntBASIC17.68■□□□□ 0.42
COPB2P35606 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.68■□□□□ 0.42
COPB2P35606 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.68■□□□□ 0.42
COPB2P35606 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
COPB2P35606 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.68■□□□□ 0.42
COPB2P35606 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 AL606495.2-201ENST00000605867 535 ntBASIC17.68■□□□□ 0.42
COPB2P35606 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.68■□□□□ 0.42
COPB2P35606 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.68■□□□□ 0.42
COPB2P35606 AL645728.2-202ENST00000641679 227 ntBASIC17.68■□□□□ 0.42
COPB2P35606 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.68■□□□□ 0.42
COPB2P35606 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
COPB2P35606 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPB2P35606 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
COPB2P35606 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
COPB2P35606 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 TPM3P8-201ENST00000330554 643 ntBASIC17.67■□□□□ 0.42
COPB2P35606 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 BTBD6P1-201ENST00000412176 1267 ntBASIC17.67■□□□□ 0.42
COPB2P35606 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
COPB2P35606 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.67■□□□□ 0.42
COPB2P35606 GOLGA2P4-201ENST00000441462 777 ntBASIC17.67■□□□□ 0.42
COPB2P35606 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.67■□□□□ 0.42
COPB2P35606 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COPB2P35606 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.67■□□□□ 0.42
COPB2P35606 AL022328.3-201ENST00000607943 679 ntBASIC17.67■□□□□ 0.42
COPB2P35606 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.67■□□□□ 0.42
COPB2P35606 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COPB2P35606 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.67■□□□□ 0.42
COPB2P35606 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
COPB2P35606 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
COPB2P35606 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPB2P35606 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.66■□□□□ 0.42
COPB2P35606 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.66■□□□□ 0.42
COPB2P35606 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
COPB2P35606 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.66■□□□□ 0.42
COPB2P35606 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COPB2P35606 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.66■□□□□ 0.42
COPB2P35606 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COPB2P35606 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
COPB2P35606 MIR326-201ENST00000362220 95 ntBASIC17.66■□□□□ 0.42
COPB2P35606 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.66■□□□□ 0.42
COPB2P35606 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.66■□□□□ 0.42
COPB2P35606 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.66■□□□□ 0.42
COPB2P35606 EEF1DP1-201ENST00000585891 896 ntBASIC17.66■□□□□ 0.42
COPB2P35606 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.66■□□□□ 0.42
COPB2P35606 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.66■□□□□ 0.42
COPB2P35606 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
COPB2P35606 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
COPB2P35606 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPB2P35606 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms