Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A4P31645 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC6A4P31645 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SLC6A4P31645 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
SLC6A4P31645 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 AC112693.3-201ENST00000624819 1983 ntBASIC15.86■□□□□ 0.13
SLC6A4P31645 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 ANKRD19P-201ENST00000338192 862 ntBASIC15.86■□□□□ 0.13
SLC6A4P31645 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 AC092933.1-201ENST00000393644 945 ntBASIC15.86■□□□□ 0.13
SLC6A4P31645 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC6A4P31645 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC6A4P31645 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC6A4P31645 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC6A4P31645 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC6A4P31645 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.86■□□□□ 0.13
SLC6A4P31645 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.86■□□□□ 0.13
SLC6A4P31645 AL022328.1-201ENST00000610050 478 ntBASIC15.86■□□□□ 0.13
SLC6A4P31645 AP005019.2-201ENST00000615104 511 ntBASIC15.86■□□□□ 0.13
SLC6A4P31645 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.86■□□□□ 0.13
SLC6A4P31645 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC6A4P31645 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC6A4P31645 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC6A4P31645 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC6A4P31645 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
SLC6A4P31645 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
SLC6A4P31645 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC6A4P31645 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A4P31645 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC6A4P31645 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
SLC6A4P31645 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SLC6A4P31645 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC6A4P31645 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC6A4P31645 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC6A4P31645 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC6A4P31645 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SLC6A4P31645 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC6A4P31645 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC6A4P31645 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC6A4P31645 AC022210.1-201ENST00000449856 793 ntBASIC15.85■□□□□ 0.13
SLC6A4P31645 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC6A4P31645 AC004066.1-201ENST00000502488 802 ntBASIC15.85■□□□□ 0.13
SLC6A4P31645 AC119751.2-201ENST00000504529 210 ntBASIC15.85■□□□□ 0.13
SLC6A4P31645 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC6A4P31645 SAMD11P1-201ENST00000571429 661 ntBASIC15.85■□□□□ 0.13
SLC6A4P31645 GNRHR2-203ENST00000581100 1187 ntBASIC15.85■□□□□ 0.13
SLC6A4P31645 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC6A4P31645 AC017083.2-201ENST00000608069 979 ntBASIC15.85■□□□□ 0.13
SLC6A4P31645 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC6A4P31645 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SLC6A4P31645 MIR6775-201ENST00000617557 69 ntBASIC15.85■□□□□ 0.13
SLC6A4P31645 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC6A4P31645 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC6A4P31645 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC6A4P31645 AC148477.4-201ENST00000613430 1793 ntBASIC15.85■□□□□ 0.13
SLC6A4P31645 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC6A4P31645 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms