Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
GDF1P27539 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.07□□□□□ -0.16
GDF1P27539 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
GDF1P27539 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.07□□□□□ -0.16
GDF1P27539 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
GDF1P27539 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 ACTG1P3-201ENST00000431775 1114 ntBASIC14.07□□□□□ -0.16
GDF1P27539 KRT43P-201ENST00000434019 910 ntBASIC14.07□□□□□ -0.16
GDF1P27539 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.07□□□□□ -0.16
GDF1P27539 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.07□□□□□ -0.16
GDF1P27539 AC009486.1-201ENST00000569860 813 ntBASIC14.07□□□□□ -0.16
GDF1P27539 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.07□□□□□ -0.16
GDF1P27539 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.07□□□□□ -0.16
GDF1P27539 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.07□□□□□ -0.16
GDF1P27539 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.07□□□□□ -0.16
GDF1P27539 AC025181.2-201ENST00000606994 802 ntBASIC14.07□□□□□ -0.16
GDF1P27539 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
GDF1P27539 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.07□□□□□ -0.16
GDF1P27539 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GDF1P27539 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
GDF1P27539 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GDF1P27539 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
GDF1P27539 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.06□□□□□ -0.16
GDF1P27539 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.06□□□□□ -0.16
GDF1P27539 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
GDF1P27539 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.06□□□□□ -0.16
GDF1P27539 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.06□□□□□ -0.16
GDF1P27539 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.06□□□□□ -0.16
GDF1P27539 AC112492.5-201ENST00000421897 457 ntBASIC14.06□□□□□ -0.16
GDF1P27539 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 AL355864.2-201ENST00000447420 863 ntBASIC14.06□□□□□ -0.16
GDF1P27539 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.06□□□□□ -0.16
GDF1P27539 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.06□□□□□ -0.16
GDF1P27539 AC068587.3-201ENST00000526613 355 ntBASIC14.06□□□□□ -0.16
GDF1P27539 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.06□□□□□ -0.16
GDF1P27539 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
GDF1P27539 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.06□□□□□ -0.16
GDF1P27539 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.06□□□□□ -0.16
GDF1P27539 AP001063.1-201ENST00000568332 529 ntBASIC14.06□□□□□ -0.16
GDF1P27539 AC106886.1-201ENST00000568660 600 ntBASIC14.06□□□□□ -0.16
GDF1P27539 AC233724.13-201ENST00000598383 410 ntBASIC14.06□□□□□ -0.16
GDF1P27539 AC017083.2-201ENST00000608069 979 ntBASIC14.06□□□□□ -0.16
GDF1P27539 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.06□□□□□ -0.16
GDF1P27539 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.06□□□□□ -0.16
GDF1P27539 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms