Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NF1P21359 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NF1P21359 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NF1P21359 MIR557-201ENST00000385239 98 ntBASIC12.33□□□□□ -0.44
NF1P21359 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NF1P21359 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NF1P21359 AC026320.2-201ENST00000434379 478 ntBASIC12.33□□□□□ -0.44
NF1P21359 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.33□□□□□ -0.44
NF1P21359 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.33□□□□□ -0.44
NF1P21359 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC12.33□□□□□ -0.44
NF1P21359 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.33□□□□□ -0.44
NF1P21359 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NF1P21359 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NF1P21359 MED11-202ENST00000573708 802 ntTSL 2 BASIC12.33□□□□□ -0.44
NF1P21359 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC12.33□□□□□ -0.44
NF1P21359 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NF1P21359 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.33□□□□□ -0.44
NF1P21359 AL512324.3-201ENST00000619383 882 ntBASIC12.33□□□□□ -0.44
NF1P21359 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NF1P21359 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.33□□□□□ -0.44
NF1P21359 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.32□□□□□ -0.44
NF1P21359 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NF1P21359 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.32□□□□□ -0.44
NF1P21359 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.32□□□□□ -0.44
NF1P21359 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.32□□□□□ -0.44
NF1P21359 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.32□□□□□ -0.44
NF1P21359 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.32□□□□□ -0.44
NF1P21359 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.32□□□□□ -0.44
NF1P21359 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.32□□□□□ -0.44
NF1P21359 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.32□□□□□ -0.44
NF1P21359 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.32□□□□□ -0.44
NF1P21359 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.32□□□□□ -0.44
NF1P21359 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.32□□□□□ -0.44
NF1P21359 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.32□□□□□ -0.44
NF1P21359 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 AC084781.1-201ENST00000613737 656 ntBASIC12.32□□□□□ -0.44
NF1P21359 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.32□□□□□ -0.44
NF1P21359 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
NF1P21359 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
NF1P21359 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NF1P21359 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NF1P21359 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.31□□□□□ -0.44
NF1P21359 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.31□□□□□ -0.44
NF1P21359 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.31□□□□□ -0.44
NF1P21359 KRT17P5-201ENST00000332088 839 ntBASIC12.31□□□□□ -0.44
NF1P21359 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NF1P21359 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC12.31□□□□□ -0.44
NF1P21359 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 AC083801.1-201ENST00000491689 358 ntBASIC12.31□□□□□ -0.44
NF1P21359 AC008723.1-201ENST00000506922 207 ntBASIC12.31□□□□□ -0.44
NF1P21359 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
NF1P21359 AC090857.1-201ENST00000527400 390 ntBASIC12.31□□□□□ -0.44
NF1P21359 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 AC026803.1-201ENST00000569130 274 ntBASIC12.31□□□□□ -0.44
NF1P21359 MIEF1-215ENST00000637854 213 ntBASIC12.31□□□□□ -0.44
NF1P21359 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.31□□□□□ -0.44
NF1P21359 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.31□□□□□ -0.44
NF1P21359 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.31□□□□□ -0.44
NF1P21359 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.31□□□□□ -0.44
NF1P21359 AP001282.1-201ENST00000531301 1499 ntBASIC12.31□□□□□ -0.44
NF1P21359 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NF1P21359 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.31□□□□□ -0.44
NF1P21359 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms