Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC093214.1-201ENST00000511688 1107 ntBASIC15.01□□□□□ -0.01
CAPN3P20807 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN3P20807 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN3P20807 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.01□□□□□ -0.01
CAPN3P20807 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN3P20807 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 AC068587.6-202ENST00000641839 5619 ntBASIC15.01□□□□□ -0.01
CAPN3P20807 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 AL607033.1-201ENST00000623900 1599 ntBASIC15.01□□□□□ -0.01
CAPN3P20807 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
CAPN3P20807 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CAPN3P20807 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CAPN3P20807 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15□□□□□ -0.01
CAPN3P20807 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15□□□□□ -0.01
CAPN3P20807 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CAPN3P20807 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15□□□□□ -0.01
CAPN3P20807 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
CAPN3P20807 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CAPN3P20807 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15□□□□□ -0.01
CAPN3P20807 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
CAPN3P20807 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15□□□□□ -0.01
CAPN3P20807 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15□□□□□ -0.01
CAPN3P20807 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 HNRNPFP1-201ENST00000391730 1133 ntBASIC15□□□□□ -0.01
CAPN3P20807 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15□□□□□ -0.01
CAPN3P20807 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15□□□□□ -0.01
CAPN3P20807 AC109322.1-201ENST00000524499 1264 ntBASIC15□□□□□ -0.01
CAPN3P20807 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15□□□□□ -0.01
CAPN3P20807 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15□□□□□ -0.01
CAPN3P20807 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15□□□□□ -0.01
CAPN3P20807 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15□□□□□ -0.01
CAPN3P20807 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15□□□□□ -0.01
CAPN3P20807 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15□□□□□ -0.01
CAPN3P20807 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15□□□□□ -0.01
CAPN3P20807 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15□□□□□ -0.01
CAPN3P20807 AC092902.6-201ENST00000641783 218 ntBASIC15□□□□□ -0.01
CAPN3P20807 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15□□□□□ -0.01
CAPN3P20807 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CAPN3P20807 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CAPN3P20807 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 CICP11-201ENST00000434745 2827 ntBASIC15□□□□□ -0.01
CAPN3P20807 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15□□□□□ -0.01
CAPN3P20807 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.99□□□□□ -0.01
CAPN3P20807 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.99□□□□□ -0.01
CAPN3P20807 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.99□□□□□ -0.01
CAPN3P20807 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CAPN3P20807 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.99□□□□□ -0.01
CAPN3P20807 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.99□□□□□ -0.01
CAPN3P20807 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.99□□□□□ -0.01
CAPN3P20807 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CAPN3P20807 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CAPN3P20807 FLJ16779-201ENST00000612722 7638 ntBASIC14.99□□□□□ -0.01
CAPN3P20807 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CAPN3P20807 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 ACE3P-201ENST00000423435 1973 ntBASIC14.99□□□□□ -0.01
CAPN3P20807 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CAPN3P20807 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CAPN3P20807 AC136604.1-201ENST00000418535 575 ntBASIC14.99□□□□□ -0.01
CAPN3P20807 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.99□□□□□ -0.01
CAPN3P20807 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CAPN3P20807 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.99□□□□□ -0.01
CAPN3P20807 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.99□□□□□ -0.01
CAPN3P20807 AC022145.2-201ENST00000598203 171 ntBASIC14.99□□□□□ -0.01
CAPN3P20807 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms